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rad51c RAD51 paralog C [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113650273, updated on 10-Apr-2024

Summary

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Gene symbol
rad51c
Gene description
RAD51 paralog C
See related
EnsemblRapid:ENSTFUG00005023512
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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See rad51c in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 20 NC_062537.1 (579773..592478, complement)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020847888.1 (3023886..3037829)

Chromosome 20 - NC_062537.1Genomic Context describing neighboring genes Neighboring gene RAB guanine nucleotide exchange factor (GEF) 1 Neighboring gene tripartite motif containing 37 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1E Neighboring gene autophagy related 101 Neighboring gene zinc finger and BTB domain containing 21 Neighboring gene uromodulin-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables crossover junction DNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in meiotic DNA recombinase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Rad51C-XRCC3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair protein RAD51 homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062537.1 Reference HZAU_PFXX_2.0

    Range
    579773..592478 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047804871.1 → XP_047660827.1  DNA repair protein RAD51 homolog 3

  2. XM_047804872.1 → XP_047660828.1  DNA repair protein RAD51 homolog 3

    Related
    ENSTFUP00005043754.1, ENSTFUT00005056566.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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