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LOC113264228 HLA class I histocompatibility antigen, A alpha chain [ Ursus arctos (brown bear) ]

Gene ID: 113264228, updated on 15-Mar-2024

Summary

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Gene symbol
LOC113264228
Gene description
HLA class I histocompatibility antigen, A alpha chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus arctos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current UrsArc2.0 (GCF_023065955.2) Unplaced Scaffold NW_026622997.1 (4994757..5020961, complement)
102 previous assembly UrsArc1.0 (GCF_023065955.1) Unplaced Scaffold NW_025929728.1 (30294842..30321046)

NW_026622997.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113264372 Neighboring gene tripartite motif containing 39 Neighboring gene ribonuclease P/MRP subunit p21 Neighboring gene uncharacterized LOC123001722 Neighboring gene dual specificity phosphatase 22 Neighboring gene uncharacterized LOC130542229

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide antigen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class Ib IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell mediated cytotoxicity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, A alpha chain
Names
HLA class I histocompatibility antigen, A-3 alpha chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023065955.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsArc2.0 Primary Assembly

Genomic

  1. NW_026622997.1 Reference UrsArc2.0 Primary Assembly

    Range
    4994757..5020961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048225754.2 → XP_048081711.2  LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, A alpha chain

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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