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Clasp2 cytoplasmic linker associated protein 2 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113195153, updated on 10-Nov-2018

Summary

Gene symbol
Clasp2
Gene description
cytoplasmic linker associated protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs

Genomic context

See Clasp2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020539899.1 (9269362..9473735, complement)

NW_020539899.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim8 A pseudogene Neighboring gene F-box and leucine rich repeat protein 2 Neighboring gene upstream binding protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial import inner membrane translocase subunit Tim23 pseudogene Neighboring gene mitochondrial import receptor subunit TOM5 homolog pseudogene Neighboring gene programmed cell death 6 interacting protein

Genomic regions, transcripts, and products

Genomic Sequence:
NW_020539899 Unplaced Scaffold Reference ASM342692v1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020539899.1 Reference ASM342692v1

    Range
    9269362..9473735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026406650.1XP_026262435.1  CLIP-associating protein 2 isoform X11

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  2. XM_026406614.1XP_026262399.1  CLIP-associating protein 2 isoform X6

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  3. XM_026406585.1XP_026262370.1  CLIP-associating protein 2 isoform X2

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:327538
    CLASP_N; CLASP N terminal
  4. XM_026406628.1XP_026262413.1  CLIP-associating protein 2 isoform X8

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  5. XM_026406623.1XP_026262408.1  CLIP-associating protein 2 isoform X7

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  6. XM_026406601.1XP_026262386.1  CLIP-associating protein 2 isoform X4

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  7. XM_026406605.1XP_026262390.1  CLIP-associating protein 2 isoform X5

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  8. XM_026406592.1XP_026262377.1  CLIP-associating protein 2 isoform X3

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  9. XM_026406577.1XP_026262362.1  CLIP-associating protein 2 isoform X1

    Conserved Domains (3) summary
    sd00044
    Location:131157
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:168198
    HEAT; HEAT repeat
    pfam12348
    Location:328539
    CLASP_N; CLASP N terminal
  10. XM_026406642.1XP_026262427.1  CLIP-associating protein 2 isoform X10

    Conserved Domains (2) summary
    sd00044
    Location:10021024
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:46238
    CLASP_N; CLASP N terminal
  11. XM_026406633.1XP_026262418.1  CLIP-associating protein 2 isoform X9

    Conserved Domains (2) summary
    sd00044
    Location:10071029
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:51243
    CLASP_N; CLASP N terminal
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