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Zscan18 zinc finger and SCAN domain containing 18 [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113175484, updated on 10-Nov-2018

Summary

Gene symbol
Zscan18
Gene description
zinc finger and SCAN domain containing 18
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs

Genomic context

See Zscan18 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540610.1 (253419..268677, complement)

NW_020540610.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 606 Neighboring gene extracellular calcium-sensing receptor Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene zinc finger protein 329 Neighboring gene uncharacterized LOC113175497

Genomic regions, transcripts, and products

Genomic Sequence:
NW_020540610 Unplaced Scaffold Reference ASM342692v1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
zinc finger and SCAN domain-containing protein 18

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540610.1 Reference ASM342692v1

    Range
    253419..268677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026379758.1XP_026235543.1  zinc finger and SCAN domain-containing protein 18

    Conserved Domains (5) summary
    smart00355
    Location:451473
    ZnF_C2H2; zinc finger
    sd00017
    Location:453473
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:54141
    SCAN; SCAN domain
    cl02581
    Location:235275
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26386
    Location:303448
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
  2. XM_026379759.1XP_026235544.1  zinc finger and SCAN domain-containing protein 18

    Conserved Domains (5) summary
    smart00355
    Location:451473
    ZnF_C2H2; zinc finger
    sd00017
    Location:453473
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:54141
    SCAN; SCAN domain
    cl02581
    Location:235275
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26386
    Location:303448
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
  3. XM_026379757.1XP_026235542.1  zinc finger and SCAN domain-containing protein 18

    Conserved Domains (5) summary
    smart00355
    Location:451473
    ZnF_C2H2; zinc finger
    sd00017
    Location:453473
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:54141
    SCAN; SCAN domain
    cl02581
    Location:235275
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    cl26386
    Location:303448
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
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