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ARHGAP42 Rho GTPase activating protein 42 [ Vulpes vulpes (red fox) ]

Gene ID: 112915785, updated on 13-Oct-2018

Summary

Gene symbol
ARHGAP42
Gene description
Rho GTPase activating protein 42
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs

Genomic context

See ARHGAP42 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356447.1 (25532266..25755643)

NW_020356447.1Genomic Context describing neighboring genes Neighboring gene contactin 5 Neighboring gene uncharacterized LOC112915784 Neighboring gene U1 small nuclear ribonucleoprotein C pseudogene Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene progesterone receptor

Genomic regions, transcripts, and products

Genomic Sequence:
NW_020356447 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
rho GTPase-activating protein 42

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356447.1 Reference VulVul2.2 Primary Assembly

    Range
    25532266..25755643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025993293.1XP_025849078.1  rho GTPase-activating protein 42 isoform X1

    Conserved Domains (4) summary
    cd12066
    Location:766820
    SH3_GRAF3; Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
    cd04374
    Location:315513
    RhoGAP_Graf; GTPase-activator protein (GAP) domain for Rho-like GTPases found in GRAF (GTPase regulator associated with focal adhesion kinase); Graf is a multi-domain protein, containing SH3 and PH domains, that binds focal adhesion kinase and influences cytoskeletal ...
    cd01249
    Location:213322
    BAR-PH_GRAF_family; GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain
    cl12013
    Location:1171
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
  2. XM_025993294.1XP_025849079.1  rho GTPase-activating protein 42 isoform X2

    Conserved Domains (4) summary
    cd12066
    Location:731785
    SH3_GRAF3; Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
    cd04374
    Location:280478
    RhoGAP_Graf; GTPase-activator protein (GAP) domain for Rho-like GTPases found in GRAF (GTPase regulator associated with focal adhesion kinase); Graf is a multi-domain protein, containing SH3 and PH domains, that binds focal adhesion kinase and influences cytoskeletal ...
    cd01249
    Location:178287
    BAR-PH_GRAF_family; GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain
    cl12013
    Location:1145
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
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