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TP53TG1 TP53 target 1 [ Homo sapiens (human) ]

Gene ID: 11257, updated on 13-Mar-2020

Summary

Official Symbol
TP53TG1provided by HGNC
Official Full Name
TP53 target 1provided by HGNC
Primary source
HGNC:HGNC:17026
See related
MIM:616403
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
P53TG1; TP53AP1; P53TG1-D; LINC00096; NCRNA00096
Expression
Ubiquitous expression in prostate (RPKM 16.5), colon (RPKM 12.1) and 25 other tissues See more

Genomic context

See TP53TG1 in Genome Data Viewer
Location:
7q21.12
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (87325347..87345492, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (86954663..86974808, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927420 Neighboring gene uncharacterized LOC105375384 Neighboring gene cyclin D binding myb like transcription factor 1 Neighboring gene transmembrane protein 243 Neighboring gene carnitine O-octanoyltransferase Neighboring gene ATP binding cassette subfamily B member 4 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 9 Neighboring gene ATP binding cassette subfamily B member 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • H_RG012D21.9
  • TP53 activated protein 1
  • TP53 target 1 (non-protein coding)
  • TP53 target gene 1
  • long intergenic non-protein coding RNA 96

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015381.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BC002709

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    87325347..87345492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_007233.1: Suppressed sequence

    Description
    NM_007233.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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