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LOC112277617 two-component response regulator-like APRR3 [ Physcomitrium patens ]

Gene ID: 112277617, updated on 9-Nov-2023

Summary

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Gene symbol
LOC112277617
Gene description
two-component response regulator-like APRR3
Locus tag
PHYPA_029594
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
Also known as
PpPRR1; PpCRR1a
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Genomic context

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See LOC112277617 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 25 NC_037277.1 (3199571..3206599, complement)

Chromosome 25 - NC_037277.1Genomic Context describing neighboring genes Neighboring gene TVP38/TMEM64 family membrane protein slr0305-like Neighboring gene F-box/LRR-repeat protein 4-like Neighboring gene uncharacterized LOC112277366 Neighboring gene SUPPRESSOR OF ABI3-5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037277.1 Chromosome 25 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudo-response regulator (PRR) homologues of the moss Physcomitrella patens: insights into the evolution of the PRR family in land plants. Satbhai SB, et al. DNA Res, 2011 Feb. PMID 21186242, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokinin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphorelay signal transduction system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
two-component response regulator-like APRR3; two-component response regulator-like PRR37
Names
circadian response regulator 1a
pseudo-response regulator homolog protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037277.1 Reference Phypa V3 Primary Assembly

    Range
    3199571..3206599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024510164.1 → XP_024365932.1  two-component response regulator-like PRR37 isoform X2

    UniProtKB/TrEMBL
    C8KHJ3, E9RFF7
    Conserved Domains (2) summary
    cd00156
    Location:186 → 301
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
    pfam06203
    Location:854 → 896
    CCT; CCT motif

  2. XM_024510163.1 → XP_024365931.1  two-component response regulator-like PRR37 isoform X2

    UniProtKB/TrEMBL
    C8KHJ3, E9RFF7
    Conserved Domains (2) summary
    cd00156
    Location:186 → 301
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
    pfam06203
    Location:854 → 896
    CCT; CCT motif

  3. XM_024510162.1 → XP_024365930.1  two-component response regulator-like PRR37 isoform X1

    UniProtKB/TrEMBL
    A0A7I4CPN0, C8KHJ3
    Conserved Domains (2) summary
    cd00156
    Location:186 → 301
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
    pfam06203
    Location:861 → 903
    CCT; CCT motif

  4. XM_024510165.1 → XP_024365933.1  two-component response regulator-like APRR3 isoform X3

    UniProtKB/TrEMBL
    A0A2K1IDU0, A0A7I4FI71
    Conserved Domains (2) summary
    cd00156
    Location:50 → 141
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
    pfam06203
    Location:701 → 743
    CCT; CCT motif
Nucleotide Protein
Heading Accession and Version

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