U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC112266677 rho GTPase-activating protein 35 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112266677, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC112266677
Gene description
rho GTPase-activating protein 35
See related
EnsemblRapid:ENSOTSG00005043680
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG14
Exon count:
9
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG14 NC_056442.1 (20216895..20313764)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 14 NC_037110.1 (17922411..18023037)

Linkage Group LG14 - NC_056442.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112267544 Neighboring gene ras-related protein Rab-4B Neighboring gene AP-2 complex subunit sigma Neighboring gene uncharacterized LOC121839190 Neighboring gene neuronal PAS domain-containing protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
rho GTPase-activating protein 35

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056442.1 Reference Otsh_v2.0 Primary Assembly

    Range
    20216895..20313764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024444358.2 → XP_024300126.2  rho GTPase-activating protein 35

    UniProtKB/TrEMBL
    A0A8C8FDA2
    Conserved Domains (4) summary
    smart00441
    Location:431 → 483
    FF; Contains two conserved F residues
    cd00882
    Location:29 → 245
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
    cd04373
    Location:1257 → 1441
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    cl40736
    Location:183 → 344
    FeoB; Fe2+ transport system protein B [Inorganic ion transport and metabolism]

  2. XM_024444357.2 → XP_024300125.2  rho GTPase-activating protein 35

    UniProtKB/TrEMBL
    A0A8C8FDA2
    Related
    ENSOTSP00005093538.2, ENSOTST00005101418.2
    Conserved Domains (4) summary
    smart00441
    Location:431 → 483
    FF; Contains two conserved F residues
    cd00882
    Location:29 → 245
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
    cd04373
    Location:1257 → 1441
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    cl40736
    Location:183 → 344
    FeoB; Fe2+ transport system protein B [Inorganic ion transport and metabolism]

  3. XM_024444359.2 → XP_024300127.2  rho GTPase-activating protein 35

    UniProtKB/TrEMBL
    A0A8C8FDA2
    Conserved Domains (4) summary
    smart00441
    Location:431 → 483
    FF; Contains two conserved F residues
    cd00882
    Location:29 → 245
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
    cd04373
    Location:1257 → 1441
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    cl40736
    Location:183 → 344
    FeoB; Fe2+ transport system protein B [Inorganic ion transport and metabolism]

  4. XM_024444360.2 → XP_024300128.2  rho GTPase-activating protein 35

    UniProtKB/TrEMBL
    A0A8C8FDA2
    Conserved Domains (4) summary
    smart00441
    Location:431 → 483
    FF; Contains two conserved F residues
    cd00882
    Location:29 → 245
    Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
    cd04373
    Location:1257 → 1441
    RhoGAP_p190; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and consists of an ...
    cl40736
    Location:183 → 344
    FeoB; Fe2+ transport system protein B [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases