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LOC112264818 cell division control protein 42 homolog [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112264818, updated on 25-Jan-2024

Summary

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Gene symbol
LOC112264818
Gene description
cell division control protein 42 homolog
See related
EnsemblRapid:ENSOTSG00005051829
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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Location:
chromosome: LG13
Exon count:
6
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG13 NC_056441.1 (35982810..36004245)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 13 NC_037109.1 (26928615..26941961)

Linkage Group LG13 - NC_056441.1Genomic Context describing neighboring genes Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like Neighboring gene triosephosphate isomerase A Neighboring gene gamma-enolase Neighboring gene chromodomain-helicase-DNA-binding protein 4-like Neighboring gene zinc finger protein 226

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification of synaptic structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division control protein 42 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056441.1 Reference Otsh_v2.0 Primary Assembly

    Range
    35982810..36004245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024441674.2 → XP_024297442.1  cell division control protein 42 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C8F0L8
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

  2. XM_024441676.2 → XP_024297444.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C8F0L8
    Related
    ENSOTSP00005122780.1, ENSOTST00005192913.1
    Conserved Domains (1) summary
    cd01874
    Location:3 → 169
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

  3. XM_024441675.2 → XP_024297443.1  cell division control protein 42 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C8F0L8
    Related
    ENSOTSP00005132099.1, ENSOTST00005132612.1
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family
Nucleotide Protein
Heading Accession and Version

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