U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Dlx1as distal-less homeobox 1, antisense [ Mus musculus (house mouse) ]

Gene ID: 111970, updated on 8-Feb-2024

Summary

Official Symbol
Dlx1asprovided by MGI
Official Full Name
distal-less homeobox 1, antisenseprovided by MGI
Primary source
MGI:MGI:1195983
See related
Ensembl:ENSMUSG00000084946 AllianceGenome:MGI:1195983
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Dix1as; Dlx1os
Summary
Acts upstream of or within embryonic cranial skeleton morphogenesis. Is expressed in several structures, including brain and branchial arch. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in whole brain E14.5 (RPKM 30.7), CNS E14 (RPKM 27.3) and 4 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Dlx1as in Genome Data Viewer
Location:
2 C2; 2 42.58 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (71360982..71368235, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (71530638..71537891, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene histone aminotransferase 1 Neighboring gene VISTA enhancer mm55 Neighboring gene nuclear protein-NHP2-like protein pseudogene Neighboring gene methionyl aminopeptidase type 1D (mitochondrial) Neighboring gene STARR-seq mESC enhancer starr_04791 Neighboring gene STARR-seq mESC enhancer starr_04792 Neighboring gene distal-less homeobox 1 Neighboring gene STARR-seq mESC enhancer starr_04793 Neighboring gene distal-less homeobox 2 Neighboring gene STARR-positive B cell enhancer mm9_chr2:71436893-71437193 Neighboring gene predicted gene, 36857

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Other Names

  • Dlx1 antisense
  • distal-less homeobox 1, opposite strand

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within embryonic cranial skeleton morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002854.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK132348
    Related
    ENSMUST00000137251.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    71360982..71368235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)