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LOC111890493 costunolide synthase-like [ Lactuca sativa (garden lettuce) ]

Gene ID: 111890493, updated on 10-Oct-2024

Summary

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Gene symbol
LOC111890493
Gene description
costunolide synthase-like
Locus tag
LSAT_V11C700356230
Gene type
protein coding
RefSeq status
MODEL
Organism
Lactuca sativa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca
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Genomic context

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See LOC111890493 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2022_12 current Lsat_Salinas_v11 (GCF_002870075.4) 7 NC_056629.2 (48346757..48348609)
101 previous assembly Lsat_Salinas_v7 (GCF_002870075.2) 7 NC_056629.1 (46434750..46436600)

Chromosome 7 - NC_056629.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene costunolide synthase-like Neighboring gene uncharacterized LOC111890470 Neighboring gene callose synthase 2-like Neighboring gene small nucleolar RNA snoR134

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
costunolide synthase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002870075.4-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lsat_Salinas_v11 Primary Assembly

Genomic

  1. NC_056629.2 Reference Lsat_Salinas_v11 Primary Assembly

    Range
    48346757..48348609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023886603.3 → XP_023742371.1  costunolide synthase-like

    UniProtKB/TrEMBL
    A0A9R1X3B4
Nucleotide Protein
Heading Accession and Version

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