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LOC11175944 U6 snRNA-associated Sm-like protein LSm3 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 11175944, updated on 4-Jan-2024

Summary

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Gene symbol
LOC11175944
Gene description
U6 snRNA-associated Sm-like protein LSm3
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (5748398..5749052, complement)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 Neighboring gene UPF0235 protein C15orf40 homolog Neighboring gene glyoxylate reductase/hydroxypyruvate reductase Neighboring gene uncharacterized LOC1281647 Neighboring gene probable H/ACA ribonucleoprotein complex subunit 1 Neighboring gene sodium-independent sulfate anion transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Lsm1-7-Pat1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U6 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U6 snRNA-associated Sm-like protein LSm3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    5748398..5749052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003435816.2 → XP_003435864.1  U6 snRNA-associated Sm-like protein LSm3

    See identical proteins and their annotated locations for XP_003435864.1

    UniProtKB/TrEMBL
    F5HMM7
    Conserved Domains (1) summary
    cd01730
    Location:14 → 95
    LSm3; Like-Sm protein 3
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases