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clasp2 cytoplasmic linker associated protein 2 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111578359, updated on 12-Oct-2018

Summary

Gene symbol
clasp2
Gene description
cytoplasmic linker associated protein 2
See related
Ensembl:ENSAOCG00000003757
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs

Genomic context

See clasp2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
50
Annotation release Status Assembly Chr Location
100 current AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373145.1 (249594..312456, complement)

NW_019373145.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 6 interacting protein Neighboring gene upstream binding protein 1 Neighboring gene F-box and leucine rich repeat protein 2 Neighboring gene sushi domain containing 5

Genomic regions, transcripts, and products

Genomic Sequence:
NW_019373145 Unplaced Scaffold Reference AmpOce1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Amphiprion ocellaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AmpOce1.0 Primary Assembly

Genomic

  1. NW_019373145.1 Reference AmpOce1.0 Primary Assembly

    Range
    249594..312456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023285075.1XP_023140843.1  CLIP-associating protein 2 isoform X5

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13401533
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:561817
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  2. XM_023285072.1XP_023140840.1  CLIP-associating protein 2 isoform X3

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13421535
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564818
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  3. XM_023285076.1XP_023140844.1  CLIP-associating protein 2 isoform X6

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13391532
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564815
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  4. XM_023285096.1XP_023140864.1  CLIP-associating protein 2 isoform X26

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12681461
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564752
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  5. XM_023285095.1XP_023140863.1  CLIP-associating protein 2 isoform X25

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12761469
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564752
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  6. XM_023285093.1XP_023140861.1  CLIP-associating protein 2 isoform X23

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12911484
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564770
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  7. XM_023285085.1XP_023140853.1  CLIP-associating protein 2 isoform X15

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13191512
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564797
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  8. XM_023285088.1XP_023140856.1  CLIP-associating protein 2 isoform X18

    Conserved Domains (6) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13061499
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564797
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    cl28089
    Location:659955
    TrkG; Trk-type K+ transport system, membrane component [Inorganic ion transport and metabolism]
  9. XM_023285087.1XP_023140855.1  CLIP-associating protein 2 isoform X17

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13071500
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564797
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  10. XM_023285082.1XP_023140850.1  CLIP-associating protein 2 isoform X12

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13271520
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564797
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  11. XM_023285073.1XP_023140841.1  CLIP-associating protein 2 isoform X4

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13401533
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564825
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  12. XM_023285071.1XP_023140839.1  CLIP-associating protein 2 isoform X2

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13471540
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564824
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  13. XM_023285081.1XP_023140849.1  CLIP-associating protein 2 isoform X11

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13271520
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564824
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  14. XM_023285070.1XP_023140838.1  CLIP-associating protein 2 isoform X1

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13481541
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564824
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  15. XM_023285094.1XP_023140862.1  CLIP-associating protein 2 isoform X24

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12891482
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:570766
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  16. XM_023285092.1XP_023140860.1  CLIP-associating protein 2 isoform X22

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12911484
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:563765
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  17. XM_023285091.1XP_023140859.1  CLIP-associating protein 2 isoform X21

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12971490
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:563771
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  18. XM_023285105.1XP_023140873.1  CLIP-associating protein 2 isoform X34

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12961489
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:570792
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  19. XM_023285086.1XP_023140854.1  CLIP-associating protein 2 isoform X16

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13161509
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:570792
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  20. XM_023285089.1XP_023140857.1  CLIP-associating protein 2 isoform X19

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13051498
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564783
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  21. XM_023285077.1XP_023140845.1  CLIP-associating protein 2 isoform X7

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13341527
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:561808
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  22. XM_023285083.1XP_023140851.1  CLIP-associating protein 2 isoform X13

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13241517
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:563800
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  23. XM_023285103.1XP_023140871.1  CLIP-associating protein 2 isoform X32

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12811474
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564778
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  24. XM_023285102.1XP_023140870.1  CLIP-associating protein 2 isoform X31

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12891482
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564778
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  25. XM_023285104.1XP_023140872.1  CLIP-associating protein 2 isoform X33

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13021495
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564806
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  26. XM_023285106.1XP_023140874.1  CLIP-associating protein 2 isoform X35

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13091502
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564806
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  27. XM_023285078.1XP_023140846.1  CLIP-associating protein 2 isoform X8

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13301523
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564806
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  28. XM_023285090.1XP_023140858.1  CLIP-associating protein 2 isoform X20

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12991492
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564797
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  29. XM_023285084.1XP_023140852.1  CLIP-associating protein 2 isoform X14

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13201513
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564825
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  30. XM_023285080.1XP_023140848.1  CLIP-associating protein 2 isoform X10

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13271520
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564824
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  31. XM_023285079.1XP_023140847.1  CLIP-associating protein 2 isoform X9

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:13281521
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:564824
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  32. XM_023285108.1XP_023140876.1  CLIP-associating protein 2 isoform X37

    Conserved Domains (5) summary
    sd00044
    Location:94118
    HEAT; HEAT repeat [structural motif]
    pfam02985
    Location:169199
    HEAT; HEAT repeat
    pfam12348
    Location:334535
    CLASP_N; CLASP N terminal
    cl26312
    Location:12881481
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:570792
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  33. XM_023285097.1XP_023140865.1  CLIP-associating protein 2 isoform X27

    Conserved Domains (4) summary
    sd00044
    Location:12281254
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:152353
    CLASP_N; CLASP N terminal
    cl26312
    Location:11661359
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:382642
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  34. XM_023285101.1XP_023140869.1  CLIP-associating protein 2 isoform X30

    Conserved Domains (4) summary
    sd00044
    Location:11781204
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:102303
    CLASP_N; CLASP N terminal
    cl26312
    Location:11161309
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:332592
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  35. XM_023285099.1XP_023140867.1  CLIP-associating protein 2 isoform X29

    Conserved Domains (4) summary
    sd00044
    Location:11791205
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:103304
    CLASP_N; CLASP N terminal
    cl26312
    Location:11171310
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:333593
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  36. XM_023285107.1XP_023140875.1  CLIP-associating protein 2 isoform X36

    Related
    ENSAOCP00000000833.1, ENSAOCT00000014263.1
    Conserved Domains (5) summary
    sd00044
    Location:11401166
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:106307
    CLASP_N; CLASP N terminal
    cl26312
    Location:10781271
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:336569
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    cl28089
    Location:431727
    TrkG; Trk-type K+ transport system, membrane component [Inorganic ion transport and metabolism]
  37. XM_023285098.1XP_023140866.1  CLIP-associating protein 2 isoform X28

    Conserved Domains (4) summary
    sd00044
    Location:11821208
    HEAT; HEAT repeat [structural motif]
    pfam12348
    Location:106307
    CLASP_N; CLASP N terminal
    cl26312
    Location:11201313
    Cnd3; Nuclear condensing complex subunits, C-term domain
    cl28033
    Location:336596
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
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