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sbds SBDS ribosome maturation factor [ Seriola dumerili (greater amberjack) ]

Gene ID: 111216929, updated on 15-Mar-2024
Gene symbol
sbds
Gene description
SBDS ribosome maturation factor
See related
Ensembl:ENSSDUG00000001528
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
all
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See sbds in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174291.1 (414620..417396, complement)

NW_019174291.1Genomic Context describing neighboring genes Neighboring gene claudin-3-like Neighboring gene claudin j Neighboring gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Neighboring gene calcium-binding protein 8-like

Genomic Sequence:
NW_019174291 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytosolic ribosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribosome maturation protein SBDS

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174291.1 Reference Sdu_1.0 Primary Assembly

    Range
    414620..417396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022738590.1 → XP_022594311.1  ribosome maturation protein SBDS

    UniProtKB/TrEMBL
    A0A3B4T7B0
    Related
    ENSSDUP00000001945.1, ENSSDUT00000002008.1
    Conserved Domains (1) summary
    cl26642
    Location:1 → 223
    SBDS_C; SBDS protein C-terminal domain
Nucleotide Protein
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