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ATF2 activating transcription factor 2 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111172890, updated on 15-Mar-2024

Summary

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Gene symbol
ATF2
Gene description
activating transcription factor 2
See related
Ensembl:ENSDLEG00000008726
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098076.1 (37679324..37759501, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160862.1 (37687379..37767556, complement)

NW_022098076.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 1 subunit Neighboring gene chimerin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene ATP synthase membrane subunit c locus 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cAMP response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098076.1 Reference ASM228892v3 Primary Assembly

    Range
    37679324..37759501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022570081.1 → XP_022425789.1  cyclic AMP-dependent transcription factor ATF-2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9MTU0
    Conserved Domains (3) summary
    cd12192
    Location:9 → 44
    GCN4_cent; GCN4 central activation domain-like acidic activation domain
    PRK14951
    Location:144 → 272
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    cd14687
    Location:296 → 356
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain

  2. XM_022570080.1 → XP_022425788.1  cyclic AMP-dependent transcription factor ATF-2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9N962
    Related
    ENSDLEP00000011957.1, ENSDLET00000013190.1
    Conserved Domains (4) summary
    cd12192
    Location:65 → 102
    GCN4_cent; GCN4 central activation domain-like acidic activation domain
    cd14687
    Location:354 → 414
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    sd00019
    Location:27 → 49
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam05109
    Location:90 → 349
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

RNA

  1. XR_002644055.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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