U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02155 long intergenic non-protein coding RNA 2155 [ Homo sapiens (human) ]

Gene ID: 111082988, updated on 17-Jun-2024

Summary

Official Symbol
LINC02155provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2155provided by HGNC
Primary source
HGNC:HGNC:53016
See related
Ensembl:ENSG00000254120 AllianceGenome:HGNC:53016
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC02155 in Genome Data Viewer
Location:
8q12.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (61889839..61894206)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (62313850..62318213)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (62802398..62806765)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19236 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:62634171-62635370 Neighboring gene microRNA 4470 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19237 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:62672336-62673535 Neighboring gene HNF1 motif-containing MPRA enhancer 71 Neighboring gene long intergenic non-protein coding RNA 2842 Neighboring gene uncharacterized LOC105375871 Neighboring gene NFE2L2 motif-containing MPRA enhancer 61 Neighboring gene C1GALT1 pseudogene 3 Neighboring gene OCT4 hESC enhancer GRCh37_chr8:62892536-62893078 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:62906743-62907244 Neighboring gene asparaginyl-tRNA synthetase 1 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_149085.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC025524
    Related
    ENST00000519215.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    61889839..61894206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    62313850..62318213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)