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LOC110962121 SH3 domain and tetratricopeptide repeat-containing protein 1 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110962121, updated on 15-Mar-2024

Summary

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Gene symbol
LOC110962121
Gene description
SH3 domain and tetratricopeptide repeat-containing protein 1
See related
Ensembl:ENSAPOG00000011235
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Also known as
sh3tc1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 23 NC_067135.1 (19619835..19645816)

Chromosome 23 - NC_067135.1Genomic Context describing neighboring genes Neighboring gene CD248 molecule, endosialin a Neighboring gene somatostatin receptor 1b Neighboring gene zinc finger protein 16 like Neighboring gene HtrA serine peptidase 3b Neighboring gene acyl-CoA oxidase 3, pristanoyl

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067135.1 Chromosome 23 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH3 domain and tetratricopeptide repeat-containing protein 1
Names
SH3 domain and tetratricopeptide repeats 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067135.1 Reference KAUST_Apoly_ChrSc

    Range
    19619835..19645816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022210022.2 → XP_022065714.2  SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X2

  2. XM_022210021.2 → XP_022065713.2  SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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