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LOC110898214 germacrene A hydroxylase-like [ Helianthus annuus (common sunflower) ]

Gene ID: 110898214, updated on 31-Jan-2024

Summary

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Gene symbol
LOC110898214
Gene description
germacrene A hydroxylase-like
Locus tag
HanXRQr2_Chr13g0583041
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Helianthus annuus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Also known as
GAO; HaGAO
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Genomic context

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Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
101 current HanXRQr2.0-SUNRISE (GCF_002127325.2) 13 NC_035445.2 (75634050..75636544)
100 previous assembly HanXRQr1.0 (GCF_002127325.1) Linkage Group 13 NC_035445.1 (80125329..80127839)

Chromosome 13 - NC_035445.2Genomic Context describing neighboring genes Neighboring gene germacrene A hydroxylase-like Neighboring gene uncharacterized LOC110898216 Neighboring gene ubiquitin carboxyl-terminal hydrolase 8 Neighboring gene dihydroneopterin aldolase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biochemical conservation and evolution of germacrene A oxidase in asteraceae. Nguyen DT, et al. J Biol Chem, 2010 May 28. PMID 20351109, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
germacrene A hydroxylase
Names
Germacrene A alcohol dehydrogenase
Germacrene A hydroxylase
germacrene A oxidase
putative cytochrome P450
putative germacrene A oxidase
XP_022000663.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001426526.1 → NP_001413455.1  germacrene A hydroxylase

    Status: VALIDATED

    Source sequence(s)
    AJ541359, GU256646, MNCJ02000328
    UniProtKB/Swiss-Prot
    D5JBX0
    UniProtKB/TrEMBL
    A0A251SU99

RefSeqs of Annotated Genomes: Helianthus annuus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HanXRQr2.0-SUNRISE Primary Assembly

Genomic

  1. NC_035445.2 Reference HanXRQr2.0-SUNRISE Primary Assembly

    Range
    75634050..75636544
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022144971.2 → XP_022000663.1  germacrene A hydroxylase

    Conserved Domains (1) summary
    cd11072
    Location:62 → 482
    CYP71-like; cytochrome P450 family 71 and similar cytochrome P450s
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D5JBX0.1 GenPept UniProtKB/Swiss-Prot:D5JBX0

Gene LinkOut

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Molecular Biology Databases