NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001270419.2 → NP_001257348.1 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AA157330, BC111774, BU621752, BX395100, CX787147, DB196544
- Consensus CDS
-
CCDS5745.1
- UniProtKB/Swiss-Prot
- B4DLX0, O95620, Q2NKK1
- UniProtKB/TrEMBL
-
A4D0R5
- Conserved Domains (1) summary
-
- cd02801
Location:28 → 257
- DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
-
NM_181581.3 → NP_853559.1 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) is protein-coding. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AA157330, BU621752, BX357552, DA133130, U62767
- Consensus CDS
-
CCDS5745.1
- UniProtKB/Swiss-Prot
- B4DLX0, O95620, Q2NKK1
- UniProtKB/TrEMBL
-
A4D0R5
- Related
- ENSP00000265720.3, ENST00000265720.8
- Conserved Domains (1) summary
-
- cd02801
Location:28 → 257
- DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
RNA
-
NR_073002.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses two alternate splice sites, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA157330, AK297195, BU621752, DB196544
-
NR_073003.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA157330, AL523141, BC111774, BU621752, DA133130
-
NR_073004.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an internal exon and uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA157330, AK294095, BU621752
-
NR_073005.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an internal exon and uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA157330, AL529385, BC111774, BU621752, DA223301, DB196544
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
107563971..107578523
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 PATCHES
Genomic
-
NW_017852930.1 Reference GRCh38.p14 PATCHES
- Range
-
409626..424178
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
108880017..108894566
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)