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THUMPD2 THUMP domain containing 2 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110587301, updated on 8-Sep-2017

Summary

Gene symbol
THUMPD2
Gene description
THUMP domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Phocidae; Neomonachus
Orthologs

Genomic context

See THUMPD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734373.1 (32009124..32047365, complement)

NW_018734373.1Genomic Context describing neighboring genes Neighboring gene MICOS complex subunit MIC13-like Neighboring gene transmembrane protein 178A Neighboring gene general transcription factor IIF subunit 2 pseudogene Neighboring gene nuclease-sensitive element-binding protein 1 pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018734373 Unplaced Scaffold Reference ASM220157v1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v1 Primary Assembly

Genomic

  1. NW_018734373.1 Reference ASM220157v1 Primary Assembly

    Range
    32009124..32047365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021697530.1XP_021553205.1  THUMP domain-containing protein 2 isoform X2

    Conserved Domains (2) summary
    smart00981
    Location:203264
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl17173
    Location:274411
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
  2. XM_021697529.1XP_021553204.1  THUMP domain-containing protein 2 isoform X1

    Conserved Domains (2) summary
    cd11715
    Location:1876
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    cl28094
    Location:206317
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
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