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Thumpd2 THUMP domain containing 2 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110550235, updated on 8-Sep-2017

Summary

Gene symbol
Thumpd2
Gene description
THUMP domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs

Genomic context

See Thumpd2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018658009.1 (969342..1007787, complement)

NW_018658009.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26-like Neighboring gene transmembrane protein 178A

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018658009 Unplaced Scaffold Reference MunDraft-v1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Meriones unguiculatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MunDraft-v1.0 Primary Assembly

Genomic

  1. NW_018658009.1 Reference MunDraft-v1.0 Primary Assembly

    Range
    969342..1007787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021639993.1XP_021495668.1  THUMP domain-containing protein 2 isoform X1

    Conserved Domains (2) summary
    smart00981
    Location:204265
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl17173
    Location:275412
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
  2. XM_021639994.1XP_021495669.1  THUMP domain-containing protein 2 isoform X2

    Conserved Domains (2) summary
    smart00981
    Location:144205
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl17173
    Location:215352
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
  3. XM_021639995.1XP_021495670.1  THUMP domain-containing protein 2 isoform X3

    Conserved Domains (2) summary
    cd11715
    Location:1876
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    cl28094
    Location:204318
    Trm11; tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]
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