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LRRFIP1 LRR binding FLII interacting protein 1 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110473517, updated on 24-Jul-2018

Summary

Gene symbol
LRRFIP1
Gene description
LRR binding FLII interacting protein 1
Locus tag
RLOC_00000422
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
LRRFIP2
Orthologs

Genomic context

See LRRFIP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656570.1 (889867..992654)

NW_018656570.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110473508 Neighboring gene RAB17, member RAS oncogene family Neighboring gene receptor activity modifying protein 1 Neighboring gene ubiquitin conjugating enzyme E2 F (putative)

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018656570 Unplaced Scaffold Reference LonStrDom1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
leucine-rich repeat flightless-interacting protein 1
Names
Leucine-rich repeat flightless-interacting protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LonStrDom1 Primary Assembly

Genomic

  1. NW_018656570.1 Reference LonStrDom1 Primary Assembly

    Range
    889867..992654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021536102.1XP_021391777.1  leucine-rich repeat flightless-interacting protein 1 isoform X2

    Conserved Domains (3) summary
    pfam09738
    Location:259455
    LRRFIP; LRRFIP family
    cl26761
    Location:8401152
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl27511
    Location:610898
    Na_Ca_ex; Sodium/calcium exchanger protein
  2. XM_021536105.1XP_021391780.1  leucine-rich repeat flightless-interacting protein 1 isoform X4

    Conserved Domains (2) summary
    pfam08614
    Location:289376
    ATG16; Autophagy protein 16 (ATG16)
    pfam09738
    Location:35310
    LRRFIP; LRRFIP family
  3. XM_021536101.1XP_021391776.1  leucine-rich repeat flightless-interacting protein 1 isoform X1

    Conserved Domains (3) summary
    pfam09738
    Location:244463
    LRRFIP; LRRFIP family
    cl26761
    Location:9111223
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl27511
    Location:681969
    Na_Ca_ex; Sodium/calcium exchanger protein
  4. XM_021536104.1XP_021391779.1  leucine-rich repeat flightless-interacting protein 1 isoform X3

    Conserved Domains (3) summary
    pfam09738
    Location:1139
    LRRFIP; LRRFIP family
    cl26761
    Location:587899
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    cl27511
    Location:357645
    Na_Ca_ex; Sodium/calcium exchanger protein
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