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LOC110435085 P-(S)-hydroxymandelonitrile lyase [ Sorghum bicolor (sorghum) ]

Gene ID: 110435085, updated on 3-Dec-2024

Summary

Gene symbol
LOC110435085
Gene description
P-(S)-hydroxymandelonitrile lyase
Locus tag
SORBI_3004G335500
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
Also known as
hnl
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Genomic context

See LOC110435085 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 4 NC_012873.2 (66773690..66778436)

Chromosome 4 - NC_012873.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110434465 Neighboring gene uncharacterized LOC110434860 Neighboring gene 40S ribosomal protein S30 Neighboring gene probable 18S rRNA (guanine-N(7))-methyltransferase Neighboring gene 50S ribosomal protein L9, chloroplastic

Genomic regions, transcripts, and products

Genomic Sequence:
NC_012873.2 Chromosome 4 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
P-(S)-hydroxymandelonitrile lyase
Names
hydroxymandelonitrile lyase
hydroxynitrile lyase
XP_021316122.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001426215.1NP_001413144.1  P-(S)-hydroxymandelonitrile lyase precursor

    Status: VALIDATED

    Source sequence(s)
    BI076000, BI245719, CB925539, CB928240, CD222795
    UniProtKB/TrEMBL
    A0A194YSZ1, A0A921R7Z7, A0A921R8J6

RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012873.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    66773690..66778436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021460447.1XP_021316122.1  P-(S)-hydroxymandelonitrile lyase

    Conserved Domains (1) summary
    pfam00450
    Location:69489
    Peptidase_S10; Serine carboxypeptidase