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Specc1 sperm antigen with calponin homology and coiled-coil domains 1 [ Mus pahari (shrew mouse) ]

Gene ID: 110332016, updated on 8-Oct-2018

Summary

Gene symbol
Specc1
Gene description
sperm antigen with calponin homology and coiled-coil domains 1
See related
Ensembl:MGP_PahariEiJ_G0017617
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs

Genomic context

See Specc1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
15
Annotation release Status Assembly Chr Location
100 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 14 NC_034603.1 (30066600..30255872)

Chromosome 14 - NC_034603.1Genomic Context describing neighboring genes Neighboring gene unc-51 like autophagy activating kinase 2 Neighboring gene A-kinase anchoring protein 10 Neighboring gene high mobility group protein B2 pseudogene Neighboring gene adenosine A2b receptor Neighboring gene zinc finger SWIM-type containing 7

Genomic regions, transcripts, and products

Genomic Sequence:
NC_034603.1 Chromosome 14 Reference PAHARI_EIJ_v1.1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Mus pahari Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034603.1 Reference PAHARI_EIJ_v1.1

    Range
    30066600..30255872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021212937.1XP_021068596.1  cytospin-B isoform X1

    Related
    MGP_PahariEiJ_P0033947, MGP_PahariEiJ_T0033947.1
    Conserved Domains (2) summary
    cd00014
    Location:9651065
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cl25732
    Location:358726
    SMC_N; RecF/RecN/SMC N terminal domain
  2. XM_021212939.1XP_021068598.1  cytospin-B isoform X2

    Related
    MGP_PahariEiJ_P0033946, MGP_PahariEiJ_T0033946.1
    Conserved Domains (3) summary
    cd00014
    Location:9561056
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cl25732
    Location:358726
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27055
    Location:683783
    MutS_III; MutS domain III
  3. XM_021212940.1XP_021068599.1  cytospin-B isoform X3

    Related
    MGP_PahariEiJ_P0033939, MGP_PahariEiJ_T0033939.1
    Conserved Domains (1) summary
    cl25732
    Location:358726
    SMC_N; RecF/RecN/SMC N terminal domain
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