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Lsm14b LSM family member 14B [ Mus pahari (shrew mouse) ]

Gene ID: 110318142, updated on 15-Mar-2024

Summary

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Gene symbol
Lsm14b
Gene description
LSM family member 14B
See related
Ensembl:MGP_PahariEiJ_G0026214
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Lsm14b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 3 NC_034592.1 (162306729..162317347)

Chromosome 3 - NC_034592.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 4 Neighboring gene ATP synthase F(0) complex subunit C1, mitochondrial pseudogene Neighboring gene proteasome 20S subunit alpha 7 Neighboring gene SS18L1 subunit of BAF chromatin remodeling complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034592.1 Chromosome 3 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein LSM14 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034592.1 Reference PAHARI_EIJ_v1.1

    Range
    162306729..162317347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029536840.1 → XP_029392700.1  protein LSM14 homolog B isoform X4

    Conserved Domains (2) summary
    cd01736
    Location:82 → 155
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:298 → 399
    FDF; FDF domain

  2. XM_029536838.1 → XP_029392698.1  protein LSM14 homolog B isoform X2

    Conserved Domains (2) summary
    cd01736
    Location:82 → 155
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:337 → 438
    FDF; FDF domain

  3. XM_029536841.1 → XP_029392701.1  protein LSM14 homolog B isoform X5

    Conserved Domains (2) summary
    cd01736
    Location:82 → 155
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:242 → 343
    FDF; FDF domain

  4. XM_021192935.2 → XP_021048594.1  protein LSM14 homolog B isoform X3

    Related
    MGP_PahariEiJ_P0067556, MGP_PahariEiJ_T0067556.1
    Conserved Domains (2) summary
    cd01736
    Location:82 → 155
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:324 → 425
    FDF; FDF domain

  5. XM_021192933.2 → XP_021048592.1  protein LSM14 homolog B isoform X1

    Related
    MGP_PahariEiJ_P0067557, MGP_PahariEiJ_T0067557.1
    Conserved Domains (2) summary
    cd01736
    Location:82 → 155
    LSm14_N; Like-Sm protein 14, N-terminal domain
    pfam09532
    Location:363 → 464
    FDF; FDF domain
Nucleotide Protein
Heading Accession and Version

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