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Itgav integrin subunit alpha V [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110311058, updated on 15-Mar-2024

Summary

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Gene symbol
Itgav
Gene description
integrin subunit alpha V
See related
Ensembl:MGP_CAROLIEiJ_G0023714
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
30
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 2 NC_034571.1 (78061292..78144396)

Chromosome 2 - NC_034571.1Genomic Context describing neighboring genes Neighboring gene mitochondrial fission regulator 2 pseudogene Neighboring gene small nucleolar RNA SNORA17 Neighboring gene zinc finger CCCH-type containing 15 Neighboring gene family with sequence similarity 171 member B Neighboring gene zinc finger SWIM-type containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034571.1 Chromosome 2 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-V

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034571.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    78061292..78144396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021184288.2 → XP_021039947.1  integrin alpha-V isoform X1

    UniProtKB/TrEMBL
    A0A6P5R5P5
    Related
    MGP_CAROLIEiJ_P0052567, MGP_CAROLIEiJ_T0052567.1
    Conserved Domains (3) summary
    smart00191
    Location:367 → 421
    Int_alpha; Integrin alpha (beta-propellor repeats)
    sd00039
    Location:126 → 183
    7WD40; WD40 repeat [structural motif]
    pfam08441
    Location:467 → 912
    Integrin_alpha2; Integrin alpha

  2. XM_021184294.2 → XP_021039953.1  integrin alpha-V isoform X2

    UniProtKB/TrEMBL
    A0A6P5R842
    Conserved Domains (3) summary
    smart00191
    Location:366 → 420
    Int_alpha; Integrin alpha (beta-propellor repeats)
    sd00039
    Location:125 → 182
    7WD40; WD40 repeat [structural motif]
    pfam08441
    Location:466 → 911
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
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