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SCO7341 RNA polymerase secondary sigma factor [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102779, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO7341
Gene description
RNA polymerase secondary sigma factor
Locus tag
SCO7341
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC4G10.20c; sigG
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. characterization and expression of sigmaG
    Title: Characterization of the alternative sigma factor sigmaG in Streptomyces coelicolor A3(2).
Submit: New GeneRIF Correction

Miscellaneous features

  • Loc: c8155654-8154989 Pfam match to entry PF00140 sigma70, Sigma-70 factor, score 200.50, E-value 2.6e-56
  • Loc: c8155702-8155673 PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2
Names
RNA polymerase secondary sigma factor
NP_631395.1
  • SC4G10.20c, sigG, possible RNA polymerase secondary sigma factor, len: 263 aa. Previously sequenced region: Streptomyces coelicolor TR:O52313 (EMBL:AF036131) (263 aa). Highly similar to Streptomyces coelicolor SW:RPOF_STRCO (EMBL:L11648) RNA polymerase sigma-F factor (287 aa), fasta scores opt: 682 z-score: 820.1 E(): 0 49.2% identity in 240 aa overlap. Contains a Prosite hit to PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2 and a Pfam match to entry PF00140 sigma70, Sigma-70 factor. A possible helix-turn-helix motif situated between residues 227..248 (+6.87 SD).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    8154965..8155756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_631395.1 RNA polymerase secondary sigma factor [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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