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SCO7235 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102673, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO7235
Gene description
hypothetical protein
Locus tag
SCO7235
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC2H12.34; SC7A12.02
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
hypothetical protein
NP_631291.1
  • SC2H12.34, possible integral membrane protein, partial CDS, len: >86 aa. Highly similar to proteins of unknown function from: Mycobacterium tuberculosis SW:YL99_MYCTU(EMBL:Z70283) (139 aa), fasta scores opt: 200 z-score: 283.7 E(): 2.5e-08 45.6% identity in 90 aa overlap and Streptomyces coelicolor TR:Q9X812(EMBL:AL049497) integral membrane protein, SC6G10.27C (132 aa), fasta scores opt: 245 z-score: 344.5 E(): 1e-11 43.0% identity in 86 aa overlap. Contains possible membrane spanning hydrophobic domains. Overlaps and extends into CDS SC7A12.02 on the adjoining cosmid.
    SC7A12.02, possible integral membrane protein, len: 136 aa. Highly similar to Streptomyces coelicolor TR:Q9X812(EMBL:AL049497) integral membrane protein, SC6G10.27C (132 aa), fasta scores opt: 333 z-score: 421.2 E(): 5.4e-16 39.4% identity in 132 aa overlap and Mycobacterium tuberculosis TR:Y00A_MYCTU(EMBL:Z70283) hypothetical 14.9 kd protein (139 aa), fasta scores opt: 284 z-score: 361.2 E(): 1.2e-12 43.4% identity in 129 aa overlap. Contains multiple possible membrane spanning hydrophobic domains.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    8043439..8043849
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_631291.1 hypothetical protein SCO7235, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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