U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO7029 binding-protein-dependent transport protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102467, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

Go to the top of the page Help
Gene symbol
SCO7029
Gene description
binding-protein-dependent transport protein
Locus tag
SCO7029
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1H10.18
NEW
Try the new Gene table
Try the new Transcript table

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Miscellaneous features

  • Loc: 7815877-7816110 Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 49.30, E-value 8.4e-11

General protein information

Go to the top of the page Help
Names
binding-protein-dependent transport protein
NP_631093.1
  • SC1H10.18, possible binding-protein-dependent transport protein, len: 318 aa. Almost identical to Streptomyces lividans TR:Q9ZI17 (EMBL:AF043654) permease, BxlF (317 aa), fasta scores opt:2000 z-score: 2320.3 E():0 98.1% identity in 318 aa overlap. Also similar to Streptococcus mutans SW:MSMF_STRMU(EMBL:M77351) multiple sugar-binding transport system permease, MsmF (290 aa), fasta scores opt: 447 z-score: 524.7 E(): 8.3e-22 29.9% identity in 271 aa overlap and Streptomyces coelicolor TR:CAB54176(EMBL:AL110470) binding-protein-dependent transport protein, SCF85.19 (300 aa), fasta scores opt: 898 z-score: 1046.1 E():0 44.6% identity in 298 aa overlap. Contains a Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component and multiple possible membrane spanning hydrophobic domains.

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7815286..7816242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_631093.1 binding-protein-dependent transport protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.