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SCO7019 alpha-amylase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102457, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO7019
Gene description
alpha-amylase
Locus tag
SCO7019
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
aml
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c7803648-7801885 Pfam match to entry PF00128 alpha-amylase, Alpha amylase, score 127.00, E-value 3.5e-34
  • Loc: c7803972-7803730 Pfam match to entry PF00041 fn3, Fibronectin type III domain, score 40.80, E-value 3.1e-08

General protein information

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Names
alpha-amylase
NP_631083.1
  • SC1H10.08c, aml, alpha-amylase (EC 3.2.1.1), len: 993. Identical to Streptomyces lividans TR:P96992(EMBL:Z86113) alpha-amylase, AmlC (993 aa), fasta scores opt: 6792 z-score: 6947.5 E(): 0 99.1% identity in 993 aa overlap. Also highly similar to the alpha-amylase domain of Paenibacillus polymyxa (Bacillus polymyxa) SW:AMYB_PAEPO(EMBL:M15817) beta/alpha-amylase precursor (1196 aa), fasta scores opt: 423 z-score: 430.0 E(): 1.6e-16 28.9% identity in 956 aa overlap. Contains a Pfam matches to entries PF00128 alpha-amylase, Alpha amylase and PF00041 fn3, Fibronectin type III domain. Also contains a possible N-terminal signal sequence.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7801756..7804737 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_631083.1 alpha-amylase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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