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SCO6979 solute-binding lipoprotein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102417, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO6979
Gene description
solute-binding lipoprotein
Locus tag
SCO6979
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC8F11.05
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 7747011-7747043 PS00013 Prokaryotic membrane lipoprotein lipid attachment site

General protein information

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Names
solute-binding lipoprotein
NP_631044.1
  • SC8F11.05, probable solute-binding lipoprotein, len: 340 aa. Highly similar to many sugar transport proteins including Bacillus subtilis SW:RBSB_BACSU(EMBL:Z92953) D-ribose-binding protein precursor, RbsB (305 aa), fasta scores opt: 222 z-score: 243.9 E(): 3.7e-06 23.0% identity in 256 aa overlap and several examples from Streptomyces coelicolor e.g. TR:Q9X837(EMBL:AL049727) solute binding protein, SC9B1.17C (337 aa), fasta scores opt: 1281 z-score: 1360.6 E():0 59.1% identity in 328 aa overlap. Contains a possible N-terminal signal sequence and an appropriately positioned Prosite hit to PS00013 Prokaryotic membrane lipoprotein lipid attachment site.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7746957..7747979
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_631044.1 solute-binding lipoprotein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Molecular Biology Databases