U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO6815 ABC transporter permease [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102254, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO6815
Gene description
ABC transporter permease
Locus tag
SCO6815
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1A2.24c
Try the new Gene page
Try the new Transcripts and proteins table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c7576428-7576342 PS00402 Binding-protein-dependent transport systems inner membrane comp sign.
  • Loc: c7576431-7576168 Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 36.40, E-value 6.3e-07
  • Loc: c7577313-7577227 PS00402 Binding-protein-dependent transport systems inner membrane comp sign.
  • Loc: c7577316-7577086 Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 36.30, E-value 7.2e-07
Names
ABC transporter permease
NP_630887.1
  • SC1A2.24c, bi-domain ABC transporter permease, len: 603 aa. The N-terminus and C-terminus appear to be discrete domains, both of which are similar to many ABC transporter permeases e.g. The N-terminus is similar to Methanobacterium thermoautotrophicum TR:O27762 (EMBL:AE000929) phosphate transporter permease (291 aa), fasta scores opt: 467 z-score: 511.4 E(): 4.5e-21 32.5% identity in 268 aa overlap. The C-terminal is similar to Escherichia coli SW:PSTA_ECOLI (EMBL:X02723) phosphate transport system permease, PstA (296 aa), fasta scores opt: 396 z-score: 434.6 E(): 8.4e-17 30.1% identity in 286 aa overlap. Contains 2x Prosite hits to PS00402 Binding-protein-dependent transport systems inner membrane comp sign and 2x Pfam matches to entries PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component. Contains multiple possible membrane spanning hydrophobic domains.

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7576036..7577847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630887.1 ABC transporter permease [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.