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SCO6684 ABC transporter ATP-binding protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102123, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO6684
Gene description
ABC transporter ATP-binding protein
Locus tag
SCO6684
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
ramB
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 7425771-7426307 Pfam match to entry PF00005 ABC_tran, ABC transporters, score 157.10, E-value 3e-43
  • Loc: 7425792-7425815 PS00017 ATP /GTP-binding site motif A (P-loop)
  • Loc: 7426095-7426139 PS00211 ABC transporters family signature

Repeated regions

  • Loc: 7425528-7425623

General protein information

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Names
ABC transporter ATP-binding protein
NP_630759.1
  • SC5A7.34, ramB, probable ABC transporter, len: 608 aa; N-terminus contains transmembrane domain, C-terminus contains ATP-binding domain. IdenticalTR:Q53819 (EMBL:U03771) potential ATP-binding membrane protein RamB (608 aa) and similar tyo many e.g. Y07D_MYCTU hypothetical ABC transporter ATP-binding protein MTCY02B10.13 (579 aa), fasta scores; opt: 456 z-score: 443.0 E(): 1.9e-17, 31.8% identity in 614 aa overlap. Contains sixteen degenerate PE repeats between the N- andC-terminal domains. Also contains PS00017 ATP /GTP-binding site motif A (P-loop), PS00211 ABC transporters family signature and Pfam match to entry PF00005 ABC_tran, ABC transporters, score 157.10, E-value 3e-43. Some similarity to RamA (E(): 2.7e-05, 33.4% identity in 628 aa overlap)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7424565..7426391
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630759.1 ABC transporter ATP-binding protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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