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SCO6566 ROK family protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102005, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO6566
Gene description
ROK family protein
Locus tag
SCO6566
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC3F9.01; SC4B5.16
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 7268167-7268273 Overlap with Streptomyces coelicolor cosmid 3F9 (EMBL:AL023862).
  • Loc: 7268431-7268985 Pfam match to entry ROK PF00480, ROK family, score 164.11
  • Loc: 7268821-7268904 PS01125 ROK family signature
Names
ROK family protein
NP_733706.1
  • SC3F9.01, unknown, partial CDS, len: >403 aa; similar to many members of the ROK (nagC/xylR) family e.g. NAGC_ECOLI N-acetylglucosamine repressor (406 aa), fasta scores; opt: 513 z-score: 578.8 E(): 5e-25, 28.6% identity in 388 aa overlap and GLK_STRCO glucokinase (EC 2.7.1.2) (glucose kinase) (317 aa), fasta scores; opt: 544 z-score: 570.9 E(): 1.4e-24, 34.4% identity in 317 aa overlap. Contains PS01125 ROK family signature and Pfam match to entry ROK PF00480, ROK family, score 164.11. Also similar to S. coelicolor SC7B7.05, probable transcriptional repressor (E(): 9.6e-25, 34.3% identity in 385 aa overlap)
    SC4B5.16, possible ROK family protein, partial CDS, len: 92aa; forms the C-terminal region of TR:O69941 (EMBL:AL023862) partial CDS, hypothetical ROK family protein on adjacent cosmid 3F9 from Streptomyces coelicolor (403 aa).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7267996..7269378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733706.1 ROK family protein, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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