U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO6451 substrate binding protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101890, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO6451
Gene description
substrate binding protein
Locus tag
SCO6451
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC9B5.18
NEW
Try the new Gene table
Try the new Transcript table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 7135316-7136839 Pfam match to entry PF00496 SBP_bac_5, Bacterial extracellular solute-binding proteins, family 5.
  • Loc: 7135346-7135378 PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
  • Loc: 7135562-7135630 PS01040 Bacterial extracellular solute-binding proteins, family 5 signature.
Names
substrate binding protein
NP_630536.1
  • SC9B5.18, probable substrate binding protein, len: 467aa; First of a five gene operon probably involved in peptide uptake. Very similar to SW:XP55_STRLI protein precursor of XP55, a major hypothetical protein from Streptomyces lividans (542 aa) fasta scores: opt: 3353, z-score: 2613.8, E(): 0, (95.9% identity in 532 aa overlap). Also similar to many substrate binding /transport proteins eg. SW:APPA_BACSU AppA oligopeptide-binding protein precursor from Bacillus subtilis (543 aa) fasta scores: opt: 717, z-score: 518.2, E(): 1.4e-21, (28.7% identity in 550 aa overlap). Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site and PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. Also contains Pfam match to entry PF00496 SBP_bac_5, Bacterial extracellular solute-binding proteins, family 5.

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7135277..7136905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630536.1 substrate binding protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.