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SCO6349 transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101790, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO6349
Gene description
transcriptional regulator
Locus tag
SCO6349
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC3A7.17
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 7011155-7011238 Pfam match to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08
  • Loc: 7011329-7012045 Pfam match to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family., score 78.80, E-value 1.1e-19
Names
transcriptional regulator
NP_630441.1
  • SC3A7.17, probable transcriptional regulator, len: 361 aa; similar to many of the lacI family e.g. LACI_ECOLI lactose operon repressor (360 aa), fasta scores; opt: 518 z-score: 705.7 E(): 4.6e-32, 33.6% identity in 339 aa overlap. Contains helix-turn-helix motif from aa 27-48 (Score 1760, +5.18 SD), and Pfam matches to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.20, E-value 1.9e-08 and to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family, score 78.80, E-value 1.1e-19

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    7011086..7012171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630441.1 transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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