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SCO6275 type I polyketide synthase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101716, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO6275
Gene description
type I polyketide synthase
Locus tag
SCO6275
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1G7.01c; SC2C4.05c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c6918663-6918616 PS00012 Phosphopantetheine attachment site
  • Loc: c6918741-6918538 Pfam match to entry PF00550 pp-binding, Phosphopantetheine attachment site, score 68.80, E-value 2.1e-17
  • Loc: c6920760-6920710 PS00216 Sugar transport proteins signature 1
  • Loc: c6921609-6921142 Pfam match to entry PF00698 Acyl_transf, Acyl transferase domain, score -119.50, E-value 0.0089
  • Loc: c6922110-6921496 Pfam match to entry PF00698 Acyl_transf, Acyl transferase domain, score 5.10, E-value 2.8e-10
  • Loc: c6922929-6922420 Pfam match to entry PF02801 ketoacyl-synt_C, Beta-ketoacyl synthase, score 346.10, E-value 3.8e-100
  • Loc: c6923214-6923164 PS00606 Beta-ketoacyl synthases active site
  • Loc: c6923706-6922951 Pfam match to entry PF00109 ketoacyl-synt, Beta-ketoacyl synthase, score 469.40, E-value 3e-137
  • Loc: c6923901-6923854 PS00012 Phosphopantetheine attachment site
  • Loc: c6923979-6923776 Pfam match to entry PF00550 pp-binding, Phosphopantetheine attachment site, score 66.20, E-value 1.1e-16
  • Loc: c6927321-6926353 Pfam match to entry PF00698 Acyl_transf, Acyl transferase domain, score 307.60, E-value 1.4e-88
  • Loc: c6928143-6927634 Pfam match to entry PF02801 ketoacyl-synt_C, Beta-ketoacyl synthase, score 328.60, E-value 7.1e-95
  • Loc: c6928917-6928165 Pfam match to entry PF00109 ketoacyl-synt, Beta-ketoacyl synthase, score 458.60, E-value 5.1e-134
  • Loc: c6929190-6928987 Pfam match to entry PF00550 pp-binding, Phosphopantetheine attachment site, score 55.10, E-value 1.3e-13
  • Loc: c6930324-6929401 Pfam match to entry PF00698 Acyl_transf, Acyl transferase domain, score 280.60, E-value 2e-80
  • Loc: c6931146-6930631 Pfam match to entry PF02801 ketoacyl-synt_C, Beta-ketoacyl synthase, score 274.60, E-value 1.3e-78
  • Loc: c6931908-6931168 Pfam match to entry PF00109 ketoacyl-synt, Beta-ketoacyl synthase, score 353.40, E-value 2.5e-102
Names
type I polyketide synthase
NP_733695.1
  • SC1G7.01c, probable type I polyketide synthase (fragment), len: >3488 aa; similar to the N-terminal region of TR:Q9L4W3 (EMBL:AF263912) Streptomyces noursei nystatin polyketide synthase NysC, 11096 aa; fasta scores: opt: 7454 Z-score: 6765.5 bits: 1268.6 E(): 0; 45.788% identity in 4285 aa overlap, to TR:O33956 (EMBL:U78289) Streptomyces fradiae tylactone synthase modules 4 & 5 TylG, 3729 aa; fasta scores: opt: 3409 Z-score: 3092.3 bits: 587.4 E(): 1.2e-164; 44.860% identity in 2568 aa overlap and to TR:CAC22145 (EMBL:AL512902) Streptomyces coelicolor SC2C4.04c, 3577 aa; fasta scores: opt: 4872 Z-score: 3412.6 bits: 646.6 E(): 2.3e-184; 58.281% identity in 2560 aa overlap. Contains Pfam matches to entries 3x PF00109 ketoacyl-synt, Beta-ketoacyl synthase, 3x PF02801 ketoacyl-synt_C, Beta-ketoacyl synthase, 3x PF00698 Acyl_transf, Acyl transferase domain, PF00550 pp-binding, Phosphopantetheine attachment site, PF00550 pp-binding, Phosphopantetheine attachment site and matches to Prosite entries PS00012 Phosphopantetheine attachment site and PS00606 Beta-ketoacyl synthases active site
    SC2C4.05c, probable type I polyketide synthase (fragment), len: >1107 aa; similar to C-terminal region of TR:O33955 (EMBL:U78289) Streptomyces fradiae tylactone synthase module 3 TylG, 1864 aa; fasta scores: opt: 2105 z-score: 2202.2 E(): 0; 46.0% identity in 1161 aa overlap. Also highly similar, in this same cosmid, to SC2C4.03c and SC2C4.04c. Contains Pfam matches to entries PF00698 Acyl_transf, Acyl transferase domain and PF00550 pp-binding, Phosphopantetheine attachment site and matches to Prosite entries PS00216 Sugar transport proteins signature 1 and PS00012 Phosphopantetheine attachment site

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6918286..6931959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733695.1 type I polyketide synthase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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