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SCO6162 two-component system response regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101603, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO6162
Gene description
two-component system response regulator
Locus tag
SCO6162
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1A9.26c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c6765772-6765689 PS00622 Bacterial regulatory proteins, luxR family signature.
  • Loc: c6766108-6765767 Pfam match to entry PF00072 response_reg, Response regulator receiver domain, score 132.90, E-value 5.6e-36
  • Loc: c6766405-6766208 Pfam match to entry PF00196 GerE, Bacterial regulatory proteins, luxR family, score 99.70, E-value 5.6e-26
Names
two-component system response regulator
NP_630267.1
  • SC1A9.26c, probable luxR family two-component system response regulator, len: 260aa; similar to a family of response regulators eg. TR:O69961 (EMBL:AL022268) probable two-component transcriptional regulator from Streptomyces coelicolor (219 aa) fasta scores; opt:1079, z-score: 1434.4, E():0, (77.5% identity in 218 aa overlap) and DEGU_BACBR (EMBL:L15444) transcriptional activator protein DegU from Bacillus brevis (236 aa) fasta scores; opt:378, z-score: 682.5, E(): 9.7e-31, (36.6% identity in 227 aa overlap). Contains PS00622 Bacterial regulatory proteins, luxR family signature, Pfam match to entry PF00196 GerE, Bacterial regulatory proteins, luxR family, score 99.70, E-value 5.6e-26, Pfam match to entry PF00072 response_reg, Response regulator receiver domain, score 132.90, E-value 5.6e-36 and an helix-turn-helix motif from: 1 to: 260, Score 1221 (+3.35 SD).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6765623..6766405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630267.1 two-component system response regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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