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SCO5978 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101420, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO5978
Gene description
hypothetical protein
Locus tag
SCO5978
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
StBAC16H6.13c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: c6553258-6553124 Pfam match to entry PF02518 HATPase_c, Histidine kinase-, DNA gyrase B-, phytochrome-like ATPase, score 14.30, E-value 0.014

General protein information

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Names
hypothetical protein
NP_630094.1
  • SCBAC16H6.13c, conserved hypothetical protein, len: 161aa: similar to many others in Streptomyces coelicolor eg. TR:Q9X7Q5 (EMBL:AL049587) hypothetical protein SC5F2A.32 (161 aa) fasta scores; opt: 222, Z-score: 255.7, 32.515% identity (36.054% ungapped) in 163 aa overlap. Also similar to TR:O69204 (EMBL:U33059) hypothetical protein from Actinosynnema pretiosum (subsp. auranticum) (144 aa) fasta scores; opt: 227, Z-score: 261.8, 39.735% identity (45.113% ungapped) in 151 aa overlap. Contains Pfam match to entry PF02518 HATPase_c, Histidine kinase-, DNA gyrase B-, phytochrome-like ATPase.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6552935..6553420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630094.1 hypothetical protein SCO5978 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Molecular Biology Databases