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SCO5966 oxidase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101408, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5966
Gene description
oxidase
Locus tag
SCO5966
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC7H1.36c; StBAC16H6.01c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c6537135-6537100 PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature
  • Loc: c6538251-6537454 Pfam match to entry PF02913 FAD-oxidase_C, FAD linked oxidases, C-terminal domain, score 53.70, E-value 4e-12
  • Loc: c6538980-6538255 Pfam match to entry PF01565 FAD_binding_4, FAD binding domain, score 144.80, E-value 1.5e-39
Names
oxidase
NP_733680.1
  • SCBAC16H6.01c, possible oxidase, len: >1032aa: similar to many of undefined function eg. TR:Q9EZK2 (EMBL:AF289509) oxidase YdiJ-like protein from Pseudomonas putida (1006 aa) fasta scores; opt: 880, Z-score: 889.5, 27.930% identity (31.672% ungapped) in 1024 aa overlap and TR:Q9F2Y0 (EMBL:AL392149) oxidoreductase SCD19.22 from Streptomyces coelicolor (951 aa) fasta scores; opt: 622, Z-score: 628.7, 49.698% identity (53.813% ungapped) in 994 aa overlap. Contains Prosite match to PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature; Pfam match to entry PF02913 FAD-oxidase_C, FAD linked oxidases, C-terminal domain and Pfam match to entry PF01565 FAD_binding_4, FAD binding domain.
    SC7H1.36c, unknown, partial CDS, len: >81 aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6535912..6539055 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733680.1 oxidase, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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