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SCO5953 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101395, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO5953
Gene description
hypothetical protein
Locus tag
SCO5953
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC7H1.23
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 6522817-6522915 Pfam match to entry G-beta PF00400, WD domain, G-beta repeats, from 1 to 34, score 27.34
  • Loc: 6522946-6523044 Pfam match to entry G-beta PF00400, WD domain, G-beta repeats, from 1 to 34, score 28.55
  • Loc: 6523810-6523908 Pfam match to entry G-beta PF00400, WD domain, G-beta repeats, from 1 to 34, score 25.74

General protein information

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Names
hypothetical protein
NP_630070.1
  • SC7H1.23, membrane protein, len: 913 aa; weakly similar to many members of the eukaryotic beta-transducin family e.g. YA3A_SCHPO Q09715 hypothetical Trp-Asp repeats containing protein (614 aa), fasta scores; opt: 139 z-score: 352.6 E(): 1.9e-12, 28.8% identity in 250 aa overlap. Contains possible membrane spanning domain around aa 200 and 3x Pfam match to entry G-beta PF00400, WD domain, G-beta repeats, scores; 27.34, 28.55 and 25.74

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6521302..6524043
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630070.1 hypothetical protein SCO5953 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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