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SCO5819 sporulation transcription factor, WhiH [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101261, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5819
Gene description
sporulation transcription factor, WhiH
Locus tag
SCO5819
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. whiHp is active specifically in aerial hyphae.
    Title: Molecular and cytological analysis of the expression of Streptomyces sporulation regulatory gene whiH.
  2. Pig-pap mutants generated both with and without amino acid limitation frequently exhibited mutations in whiH or whiG genes.
    Title: Implication of stringent response in the increase of mutability of the whiG and whiH genes during Streptomyces coelicolor development.
Submit: New GeneRIF Correction

Miscellaneous features

  • Loc: 6366556-6366732 Pfam match to entry gntR PF00392, Bacterial regulato ry proteins, gntR family, score 56.85
Names
sporulation transcription factor, WhiH
NP_629942.1
  • SC5B8.09, whiH, sporulation transcription factor, le n: 295; almost identical to whiH protein TR:E1198707 (EMBL: AJ003022) (295 aa), 99.0% identity in 295 aa overlap. First of several possible start sites shown. Also similar to man y transcriptional regulators, e.g. DGOR_ECOLI P31460 galact onate operon transcriptional regulator (177 aa), fasta scor es; opt: 240 z-score: 251.2 E(): 8.5e-07, 30.1% identity in 173 aa overlap. Contains Pfam match to entry gntR PF00392, Bacterial regulatory proteins, gntR family, score 56.85

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6366349..6367236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629942.1 sporulation transcription factor, WhiH [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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