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SCO5799 aminotransferase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101241, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5799
Gene description
aminotransferase
Locus tag
SCO5799
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC4H2.20
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 6339360-6339686 Pfam match to entry aminotran_3 PF00202, Aminotransferases class-III pyridoxal-phosphate, score 72.94
  • Loc: 6339774-6340427 Pfam match to entry aminotran_3 PF00202, Aminotransferases class-III pyridoxal-phosphate, score 175.90
  • Loc: 6340521-6340523 TTA leucine codon; potential target for action of bldA

Repeated regions

  • Loc: 6339172-6339259
  • Loc: 6339669-6339732
Names
aminotransferase
NP_629923.1
  • SC4H2.20, probable aminotransferase, len: 532; similar to many e.g. GABT_ECOLI P22256 4-aminobutyrate aminotransferase (426 aa), fasta scores; opt: 355 z-score: 385.5 E(): 3e-14, 28.8% identity in 427 aa overlap. Contains two repetitive regions: GSGSGTGPGSGTGPGTGTGPGTGPGTGPG between aa 82-104, and VTVTDAVTVTDAVTDADADAD between aa 241-261, that are not present in other aminotransferases. Also contains 2x match to Pfam match to entry aminotran_3 PF00202, Aminotransferases class-III pyridoxal-phosphate, scores 72.94 and 175.90, and TTA leucine codon; a potential target for actionof bldA

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6338949..6340547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629923.1 aminotransferase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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