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SCO5692 transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101131, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5692
Gene description
transcriptional regulator
Locus tag
SCO5692
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC5H4.16c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c6201356-6200625 Pfam match to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and sugar binding domain of the LacI family., score 5.40, E-value 9.9e-06
  • Loc: c6201518-6201462 PS00356 Bacterial regulatory proteins, lacI family signature
  • Loc: c6201527-6201447 Pfam match to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.70, E-value 1.3e-08
Names
transcriptional regulator
NP_629820.1
  • SC5H4.16c, probable transcriptional regulator, len: 337 aa; similar to SW:CELR_THEFU (EMBL:AF086819) Thermomonospora fusca transcription regulator CelR, 340 aa; fasta scores: opt: 440 z-score: 531.7 E(): 3.7e-22; 31.6% identity in 339 aa overlap. Contains Pfam matches to entries PF00356 lacI, Bacterial regulatory proteins, lacI family and PF00532 Peripla_BP_like, Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins, lacI family signature. Contains also possible helix-turn-helix motif at residues 2..23 (+6.39 SD)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6200514..6201527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629820.1 transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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