U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO5604 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101045, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5604
Gene description
hypothetical protein
Locus tag
SCO5604
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC2E1.21
NEW
Try the new Gene table
Try the new Transcript table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Names
hypothetical protein
NP_629738.1
  • SC2E1.21, unknown, len: 382 aa; N-terminus is Gly-rich, C-terminus is similar to the N-terminus of several hypothetical proteins e.g. SW:SMF_ECOLI SMF protein (374 aa), fasta scores; opt: 402 z-score: 277.5 E(): 3.2e-08, 40.7% identity in 194 aa overlap. This ORF appears to be interrupted by the following prophage at around aa 360, and to continue as the last part of SC2E1.37. The similarity to the M. tuberculosis hypothetical protein SW:YX27_MYCTU MTCY274.27c (389 aa) (fasta scores; opt: 603 z-score: 511.5 E(): 3e-21, 46.8% identity in 267 aa overlap) stops at that position and restarts in SC2E1.37. Alternative start site at aa 118 sugested by positional base preference

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6106490..6107638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629738.1 hypothetical protein SCO5604 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.