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SCO5597 signal peptidase I [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101038, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5597
Gene description
signal peptidase I
Locus tag
SCO5597
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
sip2
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 6100782-6101030 Pfam match to entry signal_pept_I PF00461, Signal peptidases I, score 42.41
  • Loc: 6101301-6101342 PS00761 Signal peptidases I signature 3
Names
signal peptidase I
NP_629731.1
  • SC2E1.14, sip2, probable signal peptidase I, len: 446 aa; similar to many e.g. LEP_HAEIN signal peptidase I (EC 3.4.21.89) (349 aa), fasta scores; opt: 151, z-score: 317.3 E(): 1.9e-10, 30.1% identity in 286 aa overlap. Contains PS00761 Signal peptidases I signature 3, Pfam match to entry signal_pept_I PF00461, Signal peptidases I, score 42.41 and probable transmembrane domain. Also similar to surrounding genes sip1 (E(): 9.7e-24, 44.9% identity in 274 aa overlap), sip3 (E(): 1.8e-28, 56.3% identity in 245 aa overlap), and sip4 (E(): 1.1e-09, 35.9% identity in 223 aa overlap). Note that after aa 325 the ORF overlaps the downstream sip3 gene SC2E1.15, and positional base preference suggests that translation is in the other frame. No error in the cosmid sequence can be found to account for this. Contains possible hydrophobic membrane spanning region

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6100668..6102008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629731.1 signal peptidase I [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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