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SCO5550 transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100990, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5550
Gene description
transcriptional regulator
Locus tag
SCO5550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1C2.31c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data indicate that SCO5550 regulates the expression of the immediately upstream gene sco5551 encoding a putative protein, probably as a transcriptional activator.
    Title: Structural and genomic DNA analysis of a putative transcription factor SCO5550 from Streptomyces coelicolor A3(2): regulating the expression of gene sco5551 as a transcriptional activator with a novel dimer shape.
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Names
transcriptional regulator
NP_629684.1
  • SC1C2.31c, probable transcriptional regulator, len: 214 aa; N-terminus is similar to the N-terminus of members of the MerR family, e.g. MERR_THIFE mercuric resistance operon regulatory protein (122 aa), fasta scores; opt: 111 z-score: 189.7 E(): 0.0026, 30.3% identity in 66 aa overlap. Contains probable helix-turn-helix motif at aa 2-23 (1799, +5.31 SD)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6049735..6050379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629684.1 transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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