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SCO5520 1-pyrroline-5-carboxylate dehydrogenase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100960, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5520
Gene description
1-pyrroline-5-carboxylate dehydrogenase
Locus tag
SCO5520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC1C2.01; SC8D9.32
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 6013517-6014704 Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenases, score 114.70, E-value 1.8e-30
  • Loc: 6013979-6014002 PS00687 Aldehyde dehydrogenases glutamic acid active site
  • Loc: 6014063-6014098 PS00070 Aldehyde dehydrogenases cysteine active site
Names
1-pyrroline-5-carboxylate dehydrogenase
NP_733667.1
  • SC1C2.01, probable delta-1-pyrroline-5-carboxylate dehydrogenase, partial CDS, len >408 aa; similar to many e.g. TR:O50443 (EMBL:AL010186) delta-1-pyrroline-5-carboxylate dehydrogenase (M. tuberculosis) (543 aa), fasta scores; opt: 1753 z-score: 2214.2 E(): 0, 65.1% identity in 407 aa overlap, and PUT2_HUMAN delta-1-pyrroline-5-carboxylate dehydrogenase (563 aa), fasta scores; opt: 1273 z-score: 1730.4 E(): 0, 48.5% identity in 408 aa overlap. Contains PS00687 and PS00070 Aldehyde dehydrogenases glutamic acid active site and cysteine active site and Pfam match to entry PF00171 aldedh, Aldehyde dehydrogenases, score 114.70, E-value 1.8e-30
    SC8D9.32, partial CDS, probable pyrroline-5-carboxylate dehydrogenase, len: >182aa; similar to many eg. TR:O50443 (EMBL:AL010186) RocA, probable pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis (543 aa) fasta scores; opt: 843, z-score: 1024.6, E(): 0, (66.5% identity in 182 aa overlap) and SW:PUT2_AGABI PruA, delta 1-pyrroline-5-carboxylate dehydrogenase from Agaricus bisporus (common mushroom) (546 aa) fasta scores; opt: 521, z-score: 634.9, E(): 4.7e-28, (44.5% identity in 182 aa overlap).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6013103..6014743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733667.1 delta-1-pyrroline-5-carboxylate dehydrogenase, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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