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SCO5478 oligopeptide transport system integral membrane protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100918, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5478
Gene description
oligopeptide transport system integral membrane protein
Locus tag
SCO5478
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC2A11.12
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 5965748-5965963 Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 34.10, E-value 3.1e-06
  • Loc: 5965751-5965837 PS00402 Binding-protein-dependent transport systems inner membrane comp signature
Names
oligopeptide transport system integral membrane protein
NP_629614.1
  • SC2A11.12, probable oligopeptide transport system integral membrane protein, len: 332 aa; similar to many e.g. OPPB_ECOLI oligopeptide transport system permease (306 aa), fasta scores; opt: 568 z-score: 807.4 E(): 0, 35.0% identity in 337 aa overlap Also similar to S. coelicolor TR:P72408 (EMBL:U68036) bldKC (323 aa), fasta scores; opt: 875 z-score: 1186.1 E(): 0 42.4% identity in 337 aa overlap. Contains PS00402 Binding-protein-dependent transport systems inner membrane comp signature and Pfam match to entry PF00528 BPD_transp, Binding-protein-dependent transport systems inner membrane component, score 34.10, E-value 3.1e-06

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5965085..5966083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629614.1 oligopeptide transport system integral membrane protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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