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SCO5458 lipoprotein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100898, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5458
Gene description
lipoprotein
Locus tag
SCO5458
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC3D11.15
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 5945179-5945211 PS00013 Prokaryotic membrane lipoprotein lipid attachment site

Repeated regions

  • Loc: 5945489-5946337
Names
lipoprotein
NP_629595.1
  • SC3D11.15, possible lipoprotein, len: 400aa; similar to many eg. TR:Q9X811 (EMBL:AL049497) hypothetical protein from Streptomyces coelicolor (424 aa) fasta scores; opt: 755, z-score: 799.1, E(): 0, 33.0% identity in 409 aa overlap. Also similar to neighbouring CDS SC3D11.14 fasta scores; opt: 1348, z-score: 1211.8, E(): 0, 53.3% identity in 394 aa overlap. Contains possible N-terminal signal sequence and Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5945149..5946351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629595.1 lipoprotein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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